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Scott Lowe scottclowe Dalhousie University Halifax, Canada http://scottclowe.com

scottclowe/matlab-schemer 678

Apply and save color schemes in MATLAB with ease.

scottclowe/matlab-schemes 131

A collection of color schemes for MATLAB

hadim/read-roi 38

Read ROI files .zip or .roi generated with ImageJ.

scottclowe/matlab-continuous-integration 24

A method of doing Continuous integration on a CI server when developing in MATLAB

scottclowe/latex-continuous-integration 8

How to set up continuous integration to build LaTeX documents

scottclowe/cbrewer2 7

Cynthia Brewer's Color Brewer colormap palettes, ported to MATLAB, with nice interpolation.

scottclowe/cpu-gpu-utilisation-logging-python 7

Log CPU and GPU utilisation at regular intervals, with Python

scottclowe/python-template-repo 7

Template repository for Python projects

mopify/mopi 6

General purpose MATLAB/Octave Package Installer

scottclowe/cpu-gpu-utilisation-logging 3

Log CPU and GPU utilisation at regular intervals

fork hanlequantum/matlab-schemer

Apply and save color schemes in MATLAB with ease.

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issue commentrochefort-lab/fissa

Stuck on 'Doing signal separation...'

@scottclowe

I tried running the Suite2P notebook on Binder and it ran out of memory (exceeded 2GB), so I think it is probably due to a recent update to Suite2P which has changed its output. Although our unit tests currently report as failing on the main repo page, that's only on Python <3.5, where holoviews is broken. Python 3.6 and 3.7 are still passing unit tests.

Since the SIMA notebook has the same problem I am not sure the problem is with Suite2P specifically. Although it might be two different issues, because the SIMA notebook binder does not run out of memory.

pocky12

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issue commentrochefort-lab/fissa

Stuck on 'Doing signal separation...'

Hi @pocky12 ,

Sorry for the delay. I'm working on it, but no update yet!

pocky12

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issue commentrochefort-lab/fissa

Stuck on 'Doing signal separation...'

Hello,

I just wanted to follow-up on this issue to see if there have been any updates! Thanks again for your assistance :)

pocky12

pocky12

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Tools for detecting mutations of interest in SARS-CoV-2 sequencing results

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🏆 A ranked list of awesome Jupyter Notebook, Hub and Lab projects (extensions, kernels, tools). Updated weekly.

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Apply and save color schemes in MATLAB with ease.

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