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kwikwag/mathml2latex 3

Javascript library for converting MathML to LaTeX, based on the MathParser Java library

kwikwag/ok-templates 1

Open Knesset Templates

kwikwag/ok-webfront 1

Frontend web server for Open Knesset.

kwikwag/biojava 0

:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java framework for processing biological data.

kwikwag/canvas-latex 0

Bringing quick and beautiful math-typesetting to HTML5's canvas.

kwikwag/cpython 0

The Python programming language

kwikwag/crouton 0

Chromium OS Universal Chroot Environment

issue commentRosettaCommons/PyRosetta.notebooks

XML in RS broken

@jadolfbr Much agreed! Ideally those cells were tested before merging, but if I recall correctly those debug statements added in #51 were merely intended as a temporary workaround to permit scheduling 03 PyRosetta unit tests from PRs in RosettaCommons/main (otherwise PyRosetta tests always were failing). Those notebooks cells still need to be addressed.

jadolfbr

comment created time in 4 hours

issue commentRosettaCommons/PyRosetta.notebooks

XML in RS broken

Those unit test errors were basically saying that this notebook was broken. Without that - I'm not quite understanding why the testing is happening in first place?

jadolfbr

comment created time in 5 hours

issue commentRosettaCommons/PyRosetta.notebooks

XML in RS broken

I may have added debug statements to cells of certain notebooks that produced unit test errors. If you remove dubug statements, please open a PR in RosettaCommons/main, pull in Pyrosetta.notebooks submodule updates, and schedule the 03 PyRosetta tests to queue PyRosetta4.notebook unit tests.

jadolfbr

comment created time in 5 hours

issue openedRosettaCommons/PyRosetta.notebooks

XML in RS broken

The function signature has changed for the parser and this needs to be fixed. Also, debug statements should only not run for long components. Not sure where that part changed. I have a branch with this fixed, but for some reason, can't push to the repo.

created time in 10 hours

startedkwikwag/mathml2latex

started time in 16 hours

issue closedRosettaCommons/PyRosetta.notebooks

cdr_selector = CDRResidueSelector() SmallKeyVector.hh line: 548

cdr_selector = CDRResidueSelector()

ERROR: Assertion active( key ) failed. ERROR:: Exit from: /home/benchmark/rosetta/source/build/PyRosetta/linux/clang-3.4.2/python-3.8/release/source/src/utility/keys/SmallKeyVector.hh line: 548 Traceback (most recent call last): File "<stdin>", line 1, in <module> RuntimeError:

File: /home/benchmark/rosetta/source/build/PyRosetta/linux/clang-3.4.2/python-3.8/release/source/src/utility/keys/SmallKeyVector.hh:548 [ ERROR ] UtilityExitException ERROR: Assertion active( key ) failed.

closed time in 5 days

jiyanbio

issue commentRosettaCommons/PyRosetta.notebooks

cdr_selector = CDRResidueSelector() SmallKeyVector.hh line: 548

sorry, I forgot run init().

jiyanbio

comment created time in 5 days

issue commentRosettaCommons/PyRosetta.notebooks

cdr_selector = CDRResidueSelector() SmallKeyVector.hh line: 548

Is this from a notebook you ran as is, or from your own programming?

If the latter, my initial guess is that you forgot to call the init() function prior to calling other PyRosetta functions.

jiyanbio

comment created time in 5 days

issue openedRosettaCommons/PyRosetta.notebooks

cdr_selector = CDRResidueSelector() SmallKeyVector.hh line: 548

cdr_selector = CDRResidueSelector()

ERROR: Assertion active( key ) failed. ERROR:: Exit from: /home/benchmark/rosetta/source/build/PyRosetta/linux/clang-3.4.2/python-3.8/release/source/src/utility/keys/SmallKeyVector.hh line: 548 Traceback (most recent call last): File "<stdin>", line 1, in <module> RuntimeError:

File: /home/benchmark/rosetta/source/build/PyRosetta/linux/clang-3.4.2/python-3.8/release/source/src/utility/keys/SmallKeyVector.hh:548 [ ERROR ] UtilityExitException ERROR: Assertion active( key ) failed.

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delete branch RosettaCommons/pybind11

delete branch : dependabot/github_actions/jwlawson/actions-setup-cmake-v1.6

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push eventRosettaCommons/pybind11

dependabot[bot]

commit sha 5d608906aa6f2f9586d65c0022cb5d29a759e6ed

chore(deps): update jwlawson/actions-setup-cmake requirement to v1.6 Updates the requirements on [jwlawson/actions-setup-cmake](https://github.com/jwlawson/actions-setup-cmake) to permit the latest version. - [Release notes](https://github.com/jwlawson/actions-setup-cmake/releases) - [Commits](https://github.com/jwlawson/actions-setup-cmake/commits/0a4250e9746afbf8007d5fc3b26e5b0577e332b9) Signed-off-by: dependabot[bot] <support@github.com>

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Sergey Lyskov

commit sha 32c4d7e17f267e10e71138a78d559b1eef17c909

Merge pull request #2 from RosettaCommons/dependabot/github_actions/jwlawson/actions-setup-cmake-v1.6 chore(deps): update jwlawson/actions-setup-cmake requirement to v1.6

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PR merged RosettaCommons/pybind11

chore(deps): update jwlawson/actions-setup-cmake requirement to v1.6 ci dependencies

Updates the requirements on jwlawson/actions-setup-cmake to permit the latest version. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/jwlawson/actions-setup-cmake/releases">jwlawson/actions-setup-cmake's releases</a>.</em></p> <blockquote> <h2>v1.6</h2> <ul> <li>Fix incorrectly selecting invalid architecture packages</li> <li>Update dependencies</li> </ul> </blockquote> </details> <details> <summary>Commits</summary> <ul> <li>See full diff in <a href="https://github.com/jwlawson/actions-setup-cmake/commits/0a4250e9746afbf8007d5fc3b26e5b0577e332b9">compare view</a></li> </ul> </details> <br />

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delete branch RosettaCommons/pybind11

delete branch : dependabot/github_actions/jwlawson/actions-setup-cmake-v1.5

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PR closed RosettaCommons/pybind11

chore(deps): update jwlawson/actions-setup-cmake requirement to v1.5 ci dependencies

Updates the requirements on jwlawson/actions-setup-cmake to permit the latest version. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/jwlawson/actions-setup-cmake/releases">jwlawson/actions-setup-cmake's releases</a>.</em></p> <blockquote> <h2>v1.5</h2> <ul> <li>Fix handling the new universal macos packages provided in cmake 3.19.2+</li> <li>Improve platform testing</li> <li>Update dependencies</li> </ul> </blockquote> </details> <details> <summary>Commits</summary> <ul> <li>See full diff in <a href="https://github.com/jwlawson/actions-setup-cmake/commits/b2390a7ca23f349493e575bbb2d838e99b9cb42d">compare view</a></li> </ul> </details> <br />

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PR opened RosettaCommons/pybind11

chore(deps): update jwlawson/actions-setup-cmake requirement to v1.6

Updates the requirements on jwlawson/actions-setup-cmake to permit the latest version. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/jwlawson/actions-setup-cmake/releases">jwlawson/actions-setup-cmake's releases</a>.</em></p> <blockquote> <h2>v1.6</h2> <ul> <li>Fix incorrectly selecting invalid architecture packages</li> <li>Update dependencies</li> </ul> </blockquote> </details> <details> <summary>Commits</summary> <ul> <li>See full diff in <a href="https://github.com/jwlawson/actions-setup-cmake/commits/0a4250e9746afbf8007d5fc3b26e5b0577e332b9">compare view</a></li> </ul> </details> <br />

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issue openedkwikwag/mathml2latex

Missing usage document 页面卡死

`let obj = new MathMLParser()

obj.parse('<math xmlns="http://www.w3.org/1998/Math/MathML"><mover><mrow><mi>A</mi><mi>B</mi></mrow><mo>→</mo></mover></math>')`

在执行parse后页面卡死 @是因为使用方法有问题吗?麻烦提供测试案例

请提供具体使用测试用例,谢谢

created time in 11 days

PR opened RosettaCommons/pybind11

chore(deps): update jwlawson/actions-setup-cmake requirement to v1.5

Updates the requirements on jwlawson/actions-setup-cmake to permit the latest version. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/jwlawson/actions-setup-cmake/releases">jwlawson/actions-setup-cmake's releases</a>.</em></p> <blockquote> <h2>v1.5</h2> <ul> <li>Fix handling the new universal macos packages provided in cmake 3.19.2+</li> <li>Improve platform testing</li> <li>Update dependencies</li> </ul> </blockquote> </details> <details> <summary>Commits</summary> <ul> <li>See full diff in <a href="https://github.com/jwlawson/actions-setup-cmake/commits/b2390a7ca23f349493e575bbb2d838e99b9cb42d">compare view</a></li> </ul> </details> <br />

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push eventRosettaCommons/binder

Sergey Lyskov

commit sha 22b85e31581a1236914f19737c9050bcbae614dd

fixing return_value_policy example

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issue closedRosettaCommons/binder

Typo in documentation of return value policy config parameter

The example

+default_pointer_return_value_policy pybind11::return_value_policy::reference

at the bottom of this page https://cppbinder.readthedocs.io/en/latest/config.html#config-file-directives

is not handled in code. Possibly this line should be +default_member_pointer_return_value_policy pybind11::return_value_policy::reference

closed time in a month

MartinKielhornPhilips

issue commentRosettaCommons/binder

Typo in documentation of return value policy config parameter

Thank you for letting me know @MartinKielhornPhilips ! This should be fixed in 3e65a2f0469268e7a87504c4f83866ab62a63edc

MartinKielhornPhilips

comment created time in a month

push eventRosettaCommons/binder

Sergey Lyskov

commit sha 3e65a2f0469268e7a87504c4f83866ab62a63edc

fixing return_value_policy example

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issue openedRosettaCommons/binder

Typo in documentation of return value policy config parameter

The example

+default_pointer_return_value_policy pybind11::return_value_policy::reference

at the bottom of this page https://cppbinder.readthedocs.io/en/latest/config.html#config-file-directives

is not handled in code. Possibly this line should be +default_member_pointer_return_value_policy pybind11::return_value_policy::reference

created time in a month

issue closedRosettaCommons/binder

LLVM 6.0 needed?

Hi, I'm thinking about testing this for one of the research projects I participate on and went over the install instructions -- I was just wondering if the release_60 for clang/llvm is a requiremement? Or can I use later/more modern LLVM releases? Thanks for the work on the project -- looks great!

closed time in a month

jtrmal

issue commentRosettaCommons/binder

LLVM 6.0 needed?

thanks a lot! y.

On Thu, Dec 10, 2020 at 17:16 andriish notifications@github.com wrote:

Hi @jtrmal https://github.com/jtrmal ,

The CI tests binder using versions of LLVM up to 11 (as comes witj Fedora), I think.

Best regards,

Andrii

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub https://github.com/RosettaCommons/binder/issues/148#issuecomment-742622534, or unsubscribe https://github.com/notifications/unsubscribe-auth/ACUKYXZQFP3YJQWTXYDSMGDSUDX7DANCNFSM4UVF3M5A .

jtrmal

comment created time in a month

issue commentRosettaCommons/binder

LLVM 6.0 needed?

Hi @jtrmal ,

The CI tests binder using versions of LLVM up to 11 (as comes witj Fedora), I think.

Best regards,

Andrii

jtrmal

comment created time in a month

issue openedRosettaCommons/binder

LLVM 6.0 needed?

Hi, I'm thinking about testing this for one of the research projects I participate on and went over the install instructions -- I was just wondering if the release_60 for clang/llvm is a requiremement? Or can I use later/more modern LLVM releases? Thanks for the work on the project -- looks great!

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push eventRosettaCommons/binder

Krzysztof Pawełczyk

commit sha 9a7d391d6ea523779ec9d1a3573be070341a32e5

Expanded support to anonymous union.

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Krzysztof Pawełczyk

commit sha 68c81340f083fb97f767ce6064ebb3f6c098d4a1

Moved test to more appropriate section.

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Sergey Lyskov

commit sha d55ac5c5cd2ec9ea674d23529480b8c1a6628008

Merge pull request #147 from AzaelCicero/master adding bindings generation for anonymous unions

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